Contributing

Add new scRNA-seq dataset

1. Prepare the scRNA-seq dataset following the example codes in https://github.com/tanyaphung/scrnaseq_viewer/tree/main/code/

• Do both the preprocessing and postprocessing (for use with MAGMA) steps

2. Add the information of your datasets to 2 CSV files: https://github.com/tanyaphung/scrnaseq_viewer/blob/main/resources/fumacelltype_datasets_master.csv and https://github.com/tanyaphung/scrnaseq_viewer/blob/main/resources/scrna_fumacelltype_master.csv

• Create a PR

3. Share the outputs from the postprocessing steps to FUMA developer

• Email: fuma.ctglab@gmail.com

• Subject: Request to add scrna data to FUMA